This function is an extension of plotHeatmap() that is optimized for automatic handling differentially expressed genes, rather than requiring manual input of a gene vector. All of the optional parameters for plotHeatmap() are also supported by this function.

plotDEGHeatmap(object, ...)

Arguments

object

Object.

...

Additional arguments.

Value

Plot.

Details

To adjust the annotation columns, modify the colData() of the counts argument, which must contain a SummarizedExperiment.

Examples

class(plotDEGHeatmap)
#> [1] "nonstandardGenericFunction" #> attr(,"package") #> [1] "methods"